Publications

Nathan Nakatsuka*, Éadaoin Harney*, Swapan Mallick, Matthew Mah, Nick Patterson, and David Reich. 2020. “ContamLD: Estimation of Ancient Nuclear DNA Contamination Using Breakdown of Linkage Disequilibrium”. Genome Biology, 21, 1, Pp. 199

Nathan Nakatsuka, Nick Patterson, Nikolaos Patsopoulos, Nicholas Altemose, Arti Tandon, Ashley Beecham, Jacob McCauley, Noriko Isobe, Stephen Hauser, Philiip De Jager, David Hafler, Jorge Oksenberg, and David Reich. 2020. “Two Genetic Variants Explain the Association of European Ancestry With Multiple Sclerosis Risk in African-Americans”. Scientific Reports, 10, 1, Pp. 16902

V. Narasimhan*, N. Patterson*, P. Moorjani+, N. Rohland+, R. Bernardos, S. Mallick, I. Lazaridis, N. Nakatsuka, authors], N. Boivin, K. Thangaraj+, D. Kennett+, M. Frachetti+, R. Pinhasi+, and D. Reich+. 2019. “The Formation of Human Populations in South and Central Asia.”. Science, 365, 6457

V. Shinde*, V. Narasimhan*, N. Rohland, S. Mallick, M. Mah, M. Lipson, N. Nakatsuka, authors], N. Rai+, and D. Reich+. 2019. “An Ancient Genome from the Indus Valley Civilization Lacks Ancestry from Steppe Pastoralists or Western Iranian Farmers”. Cell, 8674, 19, Pp. 30967-5

J. Bardill, A. Bader, N. Garrison, D. Bolnick, J. Raff, A. Walker, R. Malhi, and Summer Internship INdigenous Genomics (SING) Consortium. 2018. “Advancing the Ethics of Paleogenomics.”. Science: Policy Forum, 360, 6387, Pp. 384-85

K. Claw, M. Anderson, R. Begay, K. Tsosie, K. Fox, N. Garrison, and Summer INdigenous Genomics (SING) Consortium. 2018. “A Framework for Enhancing Ethical Genomic Research With Indigenous Communities”. Nature Communications, 9, 1, Pp. 2957

C. Posth*, N. Nakatsuka*, I. Lazaridis, P. Skoglund, S. Mallick, T. Lamnidis, N. Rohland, K. Nagele, N. Adamski, E. Bertolini, N. Broomandkhoshbacht, A. Cooper, B. Culleton, T. Ferraz, M. Ferry, A. Furtwangler, W. Haak, K. Harkins, T. Harper, T. Hunemeier, A. Lawson, B. Llamas, M. Michel, E. Nelson, J. Oppenheimer, N. Patterson, S. Schiffels, J. Sedig, K. Stewardson, S. Talamo, C. Wang, J. Hublin, M. Hubbe, K. Harvati, A. Nuevo Delaunay, J. Beier, M. Francken, P. Kaulicke, H. Reyes-Centeno, K. Rademaker, W. Trask, M. Robinson, S. Gutierrez, K. Prufer, D. Salazar-Garcia, E. Chim, L. Muller Plumm Gomes, M. Alves, A. Liryo, M. Inglez, R. Oliveira, D. Bernardo, A. Barioni, V. Wesolowski, N. Scheifler, M. Rivera, C. Plens, P. Messineo, L. Figuti, D. Corach, C. Scabuzzo, S. Eggers, P. DeBlasis, M. Reindel, C. Mendez, G. Politis, E. Tomasto-Cagigao, D. Kennett, A. Strauss, L. Fehren-Schmitz, J. Krause, and D. Reich. 2018. “Reconstructing the Deep Population History of Central and South America”. Cell, 175, 5, Pp. 1185-97

N. Nakatsuka, P. Moorjani, N. Rai, B. Sarkar, A. Tandon, N. Patterson, G. Bhavani, K. Girisha, N. Mustak, S. Srinivasan, A. Kaushik, S. Vahab, S. Jagadeesh, K. Satyamoorthy, L. Singh, D. Reich+, and K. Thangaraj+. 2017. “The Promise of Discovering Population-Specific Disease-Associated Genes in South Asia.”. Nature Genetics, 49, 9, Pp. 1403-7

L. Strittmatter, Y. Li, N. Nakatsuka, S. Calvo, Z. Grabarek, and V. Mootha. 2014. “CLYBL Is a Polymorphic Human Enzyme With Malate Synthase and β-Methylmalate Synthase Activity.”. Human Molecular Genetics, 23, 9, Pp. 2313-23

N. Nakatsuka, L. Esquivel, M. Levin, C. Browne, and K. Braun. 2013. “Identifying the Unique Challenges Facing Kanaka Maoli Kūpuna Residing Outside of Hawaiʻi.”. Hulili Journal for Multidisciplinary Research on Hawaiian Well-Being, 9, Pp. 133-51

R. Xie, J. Chung, K. Ylaya, R. Williams, N. Guerrero, N. Nakatsuka, C. Badie, and S. Hewitt. 2011. “Factors Influencing the Degradation of Archival Formalin-Fixed Paraffin-Embedded Tissue Sections”. Journal of Histochemistry and Cytochemistry, 59, 4, Pp. 356-65